Difference between revisions of "GPU610/DPS915 Student Resources"

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Problem with CUDA driver version 5.0.24 on MacBook Pro 2012 [http://blogs.adobe.com/premiereprotraining/2012/08/known-issues-with-cuda-5-0-17-driver-including-crashes-and-kernel-panics.html Fix]
 
Problem with CUDA driver version 5.0.24 on MacBook Pro 2012 [http://blogs.adobe.com/premiereprotraining/2012/08/known-issues-with-cuda-5-0-17-driver-including-crashes-and-kernel-panics.html Fix]
  
−
==Ubuntu 12.04 LTS and CUDA 5 Toolkit Installation Guide==
+
=Ubuntu 12.04 LTS and CUDA 5 Toolkit Installation Guide=
 
[http://zenit.senecac.on.ca/wiki/index.php/GPU610/DPS915_Ubuntu_and_CUDA_Installation See the guide here; work in progress]
 
[http://zenit.senecac.on.ca/wiki/index.php/GPU610/DPS915_Ubuntu_and_CUDA_Installation See the guide here; work in progress]
 +
 
= Fortran to C =
 
= Fortran to C =
 
Sample code from the TOMO project - converted by James Boelen, Raymong Hung, and Stanley Tsang
 
Sample code from the TOMO project - converted by James Boelen, Raymong Hung, and Stanley Tsang

Revision as of 10:50, 30 January 2013


GPU610/DPS915 | Student List | Group and Project Index | Student Resources | Glossary

The purpose of this page is to share useful information that can help groups with their CUDA projects.

CUDA Enabled Cards

List @ CUDA Wiki

Workshop Notes

BLAS Documentation

See the BLAS Documentation Page

Getting Started on Mac

http://developer.download.nvidia.com/compute/DevZone/docs/html/C/doc/CUDA_Getting_Started_Mac.pdf

http://developer.nvidia.com/cuda/cuda-downloads

Makefile Documentation

See the Makefile Documentation Page

Troubleshooting

Problem with CUDA driver version 5.0.24 on MacBook Pro 2012 Fix

Ubuntu 12.04 LTS and CUDA 5 Toolkit Installation Guide

See the guide here; work in progress

Fortran to C

Sample code from the TOMO project - converted by James Boelen, Raymong Hung, and Stanley Tsang

Original Fortran Subroutine

SUBROUTINE longtrack_self(direction,nrep,yp,xp,turnnow)
!-------------------------------------------------------------------------
! h: principal harmonic number
! eta0: phase slip factor
! E0: energy of synchronous particle m
! beta0: relativistic beta of synchronous particle
! phi0: synchronous phase
! q: charge state of particles
! dphi: phase difference between considered particle and synchronous one
! denergy: energy difference between considered particle and synchronous one
! nrep: pass cavity nrep times before returning data
! direction: to inverse the time advance (rotation in the bucket), 1 or -1
! xp and yp: time and energy in pixels
! dtbin and dEbin: GLOBAL time and energy pixel size in s and MeV
! omegarev0: revolution frequency
! VRF1,VRF2,VRF1dot,VRF2dot: GLOBAL RF voltages and derivatives of volts
! turnnow: present turn
!---------------------------------------------------------------------------
  IMPLICIT NONE
  REAL(SP), DIMENSION(:), INTENT(INOUT) :: xp,yp
  REAL(SP), DIMENSION(SIZE(xp)) :: dphi,denergy,selfvolt
!HPF$ distribute dphi(block)
!HPF$ align with dphi :: denergy,selfvolt,xp
  INTEGER :: mm
  INTEGER :: i,p,nrep,direction,turnnow
  dphi=(xp+xorigin)*h*omegarev0(turnnow)*dtbin-phi0(turnnow)
  denergy=(yp-yat0)*dEbin
  IF (direction.GT.0) THEN
    p=turnnow/dturns+1
    DO i=1,nrep
      forall(mm=1:size(xp)) dphi(mm)=dphi(mm)-c1(turnnow)*denergy(mm)
      turnnow=turnnow+1
      forall(mm=1:size(xp)) xp(mm)=dphi(mm)+phi0(turnnow)-&
                                   xorigin*h*omegarev0(turnnow)*dtbin
      forall(mm=1:size(xp)) xp(mm)=(xp(mm)-&
        phiwrap*FLOOR(xp(mm)/phiwrap))/(h*omegarev0(turnnow)*dtbin)
      forall(mm=1:size(xp)) selfvolt(mm)=vself(p,FLOOR(xp(mm))+1)
      forall(mm=1:size(xp)) denergy(mm)=denergy(mm)+q*((&
        (VRF1+VRF1dot*tatturn(turnnow))*SIN(dphi(mm)+phi0(turnnow))+&
        (VRF2+VRF2dot*tatturn(turnnow))*&
        SIN(hratio*(dphi(mm)+phi0(turnnow)-phi12)))+selfvolt(mm))-c2(turnnow)
    END DO
  ELSE
    p=turnnow/dturns
    DO i=1,nrep
      forall(mm=1:size(xp)) selfvolt(mm)=vself(p,FLOOR(xp(mm))+1)
      forall(mm=1:size(xp)) denergy(mm)=denergy(mm)-q*((&
        (VRF1+VRF1dot*tatturn(turnnow))*SIN(dphi(mm)+phi0(turnnow))+&
        (VRF2+VRF2dot*tatturn(turnnow))*&
        SIN(hratio*(dphi(mm)+phi0(turnnow)-phi12)))+selfvolt(mm))+c2(turnnow)
      turnnow=turnnow-1
      forall(mm=1:size(xp)) dphi(mm)=dphi(mm)+c1(turnnow)*denergy(mm)
      forall(mm=1:size(xp)) xp(mm)=dphi(mm)+phi0(turnnow)-&
                                   xorigin*h*omegarev0(turnnow)*dtbin
      forall(mm=1:size(xp)) xp(mm)=(xp(mm)-&
        phiwrap*FLOOR(xp(mm)/phiwrap))/(h*omegarev0(turnnow)*dtbin)
    END DO
  END IF
  yp=denergy/dEbin+yat0
END SUBROUTINE longtrack_self

Modified Fortran Subroutine

SUBROUTINE longtrack_self(direction,nrep,yp,xp,turnnow)
!-------------------------------------------------------------------------
! h: principal harmonic number
! eta0: phase slip factor
! E0: energy of synchronous particle
! beta0: relativistic beta of synchronous particle
! phi0: synchronous phase
! q: charge state of particles
! dphi: phase difference between considered particle and synchronous one
! denergy: energy difference between considered particle and synchronous one
! nrep: pass cavity nrep times before returning data
! direction: to inverse the time advance (rotation in the bucket), 1 or -1
! xp and yp: time and energy in pixels
! dtbin and dEbin: GLOBAL time and energy pixel size in s and MeV
! omegarev0: revolution frequency
! VRF1,VRF2,VRF1dot,VRF2dot: GLOBAL RF voltages and derivatives of volts
! turnnow: present turn
!---------------------------------------------------------------------------
  IMPLICIT NONE
  REAL(SP), DIMENSION(:), INTENT(INOUT) :: xp,yp
  REAL(SP), DIMENSION(SIZE(xp)) :: dphi,denergy,selfvolt
!HPF$ distribute dphi(block)
!HPF$ align with dphi :: denergy,selfvolt,xp
  INTEGER :: mm
  INTEGER :: i,p,nrep,direction,turnnow
  CALL gputrack_self(direction,nrep,yp,xp,turnnow, &
  SIZE(xp),dphi,denergy, &
     c1, &
     c2, &
     dEbin, &
     dtbin, &
     h, &
     hratio, &
     omegarev0, &
     phi0, &
     phi12, &
     q, &
     tatturn, &
     VRF1, &
     VRF1dot, &
     VRF2, &
     VRF2dot, &
     xorigin, &
     yat0, &
     p, &
     dturns, &
     phiwrap, &
     selfvolt, &
     profilecount-1, &
     wraplength, &
     vself )
END SUBROUTINE longtrack_self

New C Function

#include <stdio.h>
#include <math.h>

void gputrack_self_ ( \
    int  *direction, \
    int  *nrep, \
    float *yp, \
    float *xp, \
    int  *turnnow, \
    int  *sizeofarrays, \
    float *dphi, \
    float *denergy, \
    float *c1, \
    float *c2, \
    float *dEbin, \
    float *dtbin, \
    float *h, \
    float *hratio, \
    float *omegarev0, \
    float *phi0, \
    float *phi12, \
    float *q, \
    float *tatturn, \
    float *VRF1, \
    float *VRF1dot, \
    float *VRF2, \
    float *VRF2dot, \
    float *xorigin, \
    float *yat0, \
    int *p, \
    int *dturns, \
    float *phiwrap, \
    float *selfvolt, \
    int *vselfDimRow, \
    int *vselfDimCol, \
    float *vself \
)
{
    /* Local Variables */
    int l,i,mm,t;
    l = *sizeofarrays;
    t = *turnnow;
   
   
    // longtrack_self specific local variables
    int cp;
    cp = *p;
   
    /*  dphi=(xp+xorigin)*h*omegarev0(turnnow)*dtbin-phi0(turnnow) */
    for(mm = 0; mm < l; mm++) {
        dphi[mm] = (xp[mm] + *xorigin) * *h * omegarev0[t] * *dtbin - phi0[t];
    }
   
    /*  denergy=(yp-yat0)*dEbin */
    for(mm = 0; mm < l; mm++) {
        denergy[mm] = (yp[mm] - *yat0) * *dEbin;
    }

    /*   IF (direction.GT.0) THEN */
    if (*direction > 0) {
        /* p=turnnow/dturns+1 */
        cp = t / *dturns + 1;
        /* DO i=1,nrep */
        for(i = 1; i <= *nrep; i++) {
            /* forall(mm=1:size(xp)) dphi(mm)=dphi(mm)-c1(turnnow)*denergy(mm) */
            for(mm=0;mm<l;mm++) {
                dphi[mm] = dphi[mm] - c1[t] *denergy[mm];
            }
            /* turnnow=turnnow+1 */
            t=t+1;
            /* forall(mm=1:size(xp)) xp(mm)=dphi(mm)+phi0(turnnow)-&
                xorigin*h*omegarev0(turnnow)*dtbin */
            for(mm=0;mm<l;mm++) {
                xp[mm] = dphi[mm] + phi0[t] - \
                *xorigin * *h * omegarev0[t] * *dtbin;
            }
            /* forall(mm=1:size(xp)) xp(mm)=(xp(mm)-&
                phiwrap*FLOOR(xp(mm)/phiwrap))/(h*omegarev0(turnnow)*dtbin) */
            for(mm = 0; mm < l; mm++) {
                xp[mm] = (xp[mm] - \
                *phiwrap * floor(xp[mm] / *phiwrap)) / (*h * omegarev0[t] * *dtbin);
            }
            /* forall(mm=1:size(xp)) selfvolt(mm)=vself(p,FLOOR(xp(mm))+1) */
            for(mm = 0; mm < l; mm++) {
                int itemp = floor(xp[mm]);
                selfvolt[mm] = vself[(*vselfDimRow * (itemp)) + (cp-1)];
            }
            /* forall(mm=1:size(xp)) denergy(mm)=denergy(mm)+q*((&
                (VRF1+VRF1dot*tatturn(turnnow))*SIN(dphi(mm)+phi0(turnnow))+&
                (VRF2+VRF2dot*tatturn(turnnow))*&
                SIN(hratio*(dphi(mm)+phi0(turnnow)-phi12)))+selfvolt(mm))-c2(turnnow) */
            for(mm = 0; mm < l; mm++) {
                denergy[mm] = denergy[mm] + *q *(( \
                (*VRF1 + *VRF1dot * tatturn[t]) * sin(dphi[mm] + phi0[t]) + \
                (*VRF2 + *VRF2dot * tatturn[t]) * \
                sin(*hratio * (dphi[mm] + phi0[t] - *phi12))) + selfvolt[mm]) -c2[t];
            }
        /*     END DO */
        }
    }
      else {
        // p=turnnow/dturns
        cp = t / *dturns;
        // DO i=1,nrep
        for (i=1;i<=*nrep;i++) {
            // forall(mm=1:size(xp)) selfvolt(mm)=vself(p,FLOOR(xp(mm))+1)
            for(mm = 0; mm < l; mm++) {
                int itemp = (int)floor(xp[mm]);
                selfvolt[mm] = vself[(*vselfDimRow*(itemp)) + (cp-1)];
            }
            /* forall(mm=1:size(xp)) denergy(mm)=denergy(mm)-q*((&
                (VRF1+VRF1dot*tatturn(turnnow))*SIN(dphi(mm)+phi0(turnnow))+&
                (VRF2+VRF2dot*tatturn(turnnow))*&
                SIN(hratio*(dphi(mm)+phi0(turnnow)-phi12)))+selfvolt(mm))+c2(turnnow) */
            for(mm = 0; mm < l; mm++) {
                denergy[mm]=denergy[mm] - *q *(( \
                (*VRF1 + *VRF1dot * tatturn[t]) *sin(dphi[mm] + phi0[t]) + \
                (*VRF2 + *VRF2dot * tatturn[t]) * \
                sin(*hratio * (dphi[mm] + phi0[t] - *phi12))) + selfvolt[mm]) + c2[t];
            }
            // turnnow=turnnow-1
            t--;
            /* forall(mm=1:size(xp)) dphi(mm)=dphi(mm)-c1(turnnow)*denergy(mm) */
            for(mm = 0; mm < l; mm++) {
                dphi[mm]=dphi[mm] + c1[t] * denergy[mm];
            }
            /* forall(mm=1:size(xp)) xp(mm)=dphi(mm)+phi0(turnnow)-&
                xorigin*h*omegarev0(turnnow)*dtbin */
            for(mm = 0; mm < l; mm++) {
                xp[mm] = dphi[mm] + phi0[t] - \
                *xorigin * *h * omegarev0[t] * *dtbin;
            }
            /* forall(mm=1:size(xp)) xp(mm)=(xp(mm)-&
                phiwrap*FLOOR(xp(mm)/phiwrap))/(h*omegarev0(turnnow)*dtbin) */
            for(mm = 0; mm < l; mm++) {
                xp[mm] = (xp[mm] - \
                *phiwrap * floor(xp[mm] / *phiwrap)) / (*h * omegarev0[t] * *dtbin);
            }
        }
    }
   
    // yp=denergy/dEbin+yat0
    for(mm=0; mm<l; mm++) {
        yp[mm] = denergy[mm] / *dEbin + *yat0;
    }   

    *turnnow = t;
   
  return;
}
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